Detta bör göra vad du vill:
WITH a AS (
SELECT item.id, string_agg(prefered_store.store::varchar, ',') wishlist_stores
FROM item, list_wishlist, wishlist, prefered_store
WHERE item.list=list_wishlist.list
AND list_wishlist.wishlist=wishlist.id
AND wishlist.prefered_stores=prefered_store.id
GROUP BY item.id
), b AS (
SELECT item.id,
string_agg(
prefered_store.store::varchar || ',' || prefered_store.comment,
' ; ') item_stores_comments
FROM item, prefered_store
WHERE item.prefered_stores=prefered_store.id
GROUP BY item.id
)
SELECT a.id,item_stores_comments,wishlist_stores
FROM a,b
WHERE a.id=b.id